Parameters

segments : 3D array of int, shape (Z, Y, X)

The label field/superpixels found by SLIC.

min_size : int

The minimum size of the segment

max_size : int

The maximum size of the segment. This is done for performance reasons, to pre-allocate a sufficiently large array for the breadth first search

start_label : int

The label indexing start value.

Returns

connected_segments : 3D array of int, shape (Z, Y, X)

A label field with connected labels starting at label=1

Helper function to remove small disconnected regions from the labels

Examples

See :

Local connectivity graph

Hover to see nodes names; edges to Self not shown, Caped at 50 nodes.

Using a canvas is more power efficient and can get hundred of nodes ; but does not allow hyperlinks; , arrows or text (beyond on hover)

SVG is more flexible but power hungry; and does not scale well to 50 + nodes.

All aboves nodes referred to, (or are referred from) current nodes; Edges from Self to other have been omitted (or all nodes would be connected to the central node "self" which is not useful). Nodes are colored by the library they belong to, and scaled with the number of references pointing them

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